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OpenSPIM publications

Pitrone P. G., Schindelin J., Stuyvenberg L., Preibisch S., Weber M.; Eliceiri K. W., Huisken J., Tomancak P. (2013) OpenSPIM: an open access light sheet microscopy platform Nat. Methods in press PDF doi: 10.1038/nmeth.2507, Supplement. See also the directors' cut.

Costa A., Candeo A., Fieramonti L., Valentini G., Bassi A. (2013) Calcium Dynamics in Root Cells of Arabidopsis thaliana Visualized with Selective Plane Illumination Microscopy PLoS ONE 8(10) doi:10.1371/journal.pone.0075646.

Zhengyi Yang, Martynas Prokopas, Jonathan Nylk, Clara Coll-Lladó, Frank J. Gunn-Moore, David E. K. Ferrier, Tom Vettenburg, and Kishan Dholakia (2014), A compact Airy beam light sheet microscope with a tilted cylindrical lens Biomed. Opt. Express 5, 3434-3442 doi:10.1364/BOE.5.003434.

Stephanie Höhn, Aurelia R. Honerkamp-Smith, Pierre A. Haas, Philipp Khuc Trong, and Raymond E. Goldstein (2015) Dynamics of a Volvox Embryo Turning Itself Inside Out Physical Review Letters 114, 178101

OpenSPIM-based setups

Stefaniuk et al (2016) Light-sheet microscopy imaging of a whole cleared rat brain with Thy1-GFP transgene Scientific Reports doi: 10.1038/srep28209

Yang et al (2016) A compact light-sheet microscope for the study of the mammalian central nervous system Scientific Reports doi:10.1038/srep26317

Related publications

Gualda, E. J., Vale, T., Almada, P., Feijó, J. A., Martins, G. G., & Moreno, N. (2013). OpenSpinMicroscopy: an open-source integrated microscopy platform. Nature methods. doi: 10.1038/nmeth.2508

Greger, K., Swoger, J., Stelzer, E. H. K. Basic building units and properties of a fluorescence single plane illumination microscope Rev. Sci. Instrum. 78, 023705 (2007); (a technical paper about SPIM containing a detailed description of the setup)