[OpenSPIM] "Acquire SPIM image" crash
Martin Capek
martin.capek at fgu.cas.cz
Wed Nov 11 06:26:49 CST 2015
Hi HongKee,
yes, please, send it to me, I will very appreciate it. Martin
Dne 11.11.2015 v 11:19 HongKee Moon napsal(a):
> Hi Martin,
>
> Maybe, I can help in this case. However, the problem is that I cannot
> reproduce that error because I have a different setup.
> One of my doubts is that we try to get the values from stages in the
> source
> code(https://github.com/openspim/SPIMAcquisition/blob/master/src/main/java/spim/SPIMAcquisition.java#L1057-L1077).
> It seemed to cause the error.
>
> If you would not mind, I can provide you a custom-made plugin for
> verifying the problem, which might involve several (sending a plugin |
> receiving a result)+.
> Then, I would be able to fix the bug. Please, let me know if you like
> this way.
>
> Cheers,
> HongKee
>
>
>> On Nov 10, 2015, at 6:40 PM, Martin Capek <martin.capek at fgu.cas.cz
>> <mailto:martin.capek at fgu.cas.cz>> wrote:
>>
>> Dear all,
>> could anybody help me with the following software problem?
>>
>> Micromanager knows all components of our SPIM system: CUBE laser,
>> Picard stage, Andor camera. I can use all of them independently
>> without troubles in MM: opening and closing laser shutter, moving
>> with the stage in "Stage Control", seeing images in "Live" view.
>> However, when opening "Acquire SPIM image", nothing happens and the
>> Java exceptions are then in the corelog, please, see the attachments.
>>
>> Thank you very much for your help and comments!
>> Martin
>>
>>
>> ----------------------
>>
>> Martin Capek, Ph.D.
>> Dpt. Biomathematics
>>
>> Institute of Physiology ASCR, v.v.i.
>> Videnska 1083
>> 142 20 Praha 4
>>
>> Tel. +420 241 062 334
>> http://fgu.cas.cz <http://fgu.cas.cz/>
>>
>>
>>
>>
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>> <CoreLog20151110T164802_pid5508.txt>_______________________________________________
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>
>
> --
> HongKee Moon
> Software Engineer
> Scientific Computing Facility
>
> Max Planck Institute of Molecular Cell Biology and Genetics
> Pfotenhauerstr. 108
> 01307 Dresden
> Germany
>
> fon: +49 351 210 2740
> fax: +49 351 210 1689
> www.mpi-cbg.de <http://www.mpi-cbg.de>
>
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