[OpenSPIM] Image Stitching Best Practices

Pavel Tomancak tomancak at mpi-cbg.de
Sat Jun 27 04:49:29 CDT 2015


Dear Gabriel,

Yes, stitching should work. This is how the zebrafish example was assembled:

http://openspim.org/images/6/61/0-5xScale_Fused.ogv

All the best

PAvel


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Pavel Tomancak, Ph.D.

Group Leader
Max Planck Institute of Molecular Cell Biology and Genetics
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email: tomancak at mpi-cbg.de
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twitter: @PavelTomancak
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On Jun 27, 2015, at 7:18 AM, Gabriel Davis Jones <gabriel.jones at florey.edu.au> wrote:

> Hi All,
> 
> We are currently imaging large volumes that require us to acquire multiple stacks of the same angle.
> Is there currently a best way to stitch images acquired OpenSPIM?
> Should we use the grid/collection stitching plugin or is there a better way to go about it?
> 
> Thanks,
> 
> Gabriel
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> OpenSPIM mailing list
> OpenSPIM at openspim.org
> http://openspim.org/mailman/listinfo/openspim

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