[OpenSPIM] OpenSPIM in 64bit system?

[Ke Li]

For base installation, you mean install the OpenSPIM/Fiji package here:
http://openspim.org/Downloads again?

I followed the troubleshooting instructions in the compatibility tab and
the result is "its an incompatible application".

I did the following steps to open the uManager studio:

   1. Download the Fiji package of the continuous release version for
Windows 7(64bit) from  : http://fiji.sc/Fiji

   2. Download the OpenSPIM package (*OpenSPIM-20140207.zip*) from :
http://openspim.org/Downloads

   3. Launch Fiji: in the Fiji.app/folder, open *ImageJ-win64.exe*

   4. Update Fiji (and OpenSPIM and uManager):* Help->Update Fiji *

   5. Run Micromanager Studio: In the *OpenSPIM.app* folder, open
*ImageJ-win32.exe*, then *plugins->Micro-manager->Micro-manager studio*
(Before this step, I have followed your steps and set the compatibility
mode of the *ImageJ-win32.exe* as Windows XP (Service Pack 3))

After Step 5, an error shows as follows:
*    Error:Failed to load the MMCoreJ_wrap native library
mmcorej.MMCoreJJNI.swig_module_init()V*

To solve this error, I copied the file *MMCoreJ_wrap.dll* in the *mm*
folder of the *OpenSPIM.app* folder into the same directory of the
*ImageJ-win32.exe.
*Then when I reloaded the uManager studio from the ImageJ (32bit), the
error was as follows:
   *Error:Failed to load the MMcoreJ_wrap native library *
*
 C:\Users\Kuolab\Downloads\SPIM\OpenSPIM-20140207\OpenSPIM.app\MMCoreJ_wrap.dll:
Can't load IA 32-bit. dll on a AMD 64-bit platform. *

    I tried to open the uManager studio from *ImageJ-win32.exe and*
*ImageJ-win64.exe*, while the second error above happened all the time in
the two cases.

   The camera driver has been installed correctly before based on the test
image results.

Is there any step I misconducted? (Maybe copying the *MMCoreJ_warp.dll*
into the same directory of the *ImageJ-win32.exe* is not correct?)

Thanks,
Ke

Ke Li
Research Assistant
Biomedical Engineering
Johns Hopkins University
Phone: 410-934-9802
Email: kli26 at jhu.edu


On Tue, Jul 8, 2014 at 5:16 PM, Kieran Short <kieran.short at gmail.com> wrote:

> This is strange. I'm not sure what OpenSPIM fiji build we are running but
> it works here.
>
> Have you tried going back to a base installation?
>
> It sounds odd that uManager can even detect your pc as a "amd64" system as
> compatibility mode should mask that as 32bit.
>
> What says "its an incompatible application"?
>
> Of course, mm *should* be able to load a 32bit dll on 64bit architecture.
> I don't understand why that should be a problem for mm in the first place.
> The whole x86 instruction set is encapsulated within the x64 set. To
> Johannes/Mark is this directly related to the available jre?
> On 09/07/2014 5:18 AM, "Ke Li" <tianlankeke at gmail.com> wrote:
>
>> Hi Kieran,
>>
>> I followed your suggestion. While the problem still existed. When I tried
>> to launch the uManager studio from the ImageJ(ImageJ-win32.exe) in the
>> OpenSPIM.app folder, an error: *Failed to load the MMCoreJ_wrap native
>> library* (*Can't load IA 32-bit.dll on a AMD 64-bit platform*) showed
>> every time. I did the troubleshooting and the result showed that it's a
>> incompatible application.
>>
>> Is there any other way to solve this problem?
>>
>> Thanks,
>> Ke
>>
>> Ke Li
>> Research Assistant
>> Biomedical Engineering
>> Johns Hopkins University
>> Phone: 410-934-9802
>> Email: kli26 at jhu.edu
>>
>>
>> On Mon, Jul 7, 2014 at 9:03 PM, Ke Li <tianlankeke at gmail.com> wrote:
>>
>>> Hi Kieran,
>>>
>>> Thanks so much for your solution. I'll try it tomorrow.
>>>
>>> Best,
>>> Ke
>>>
>>> Kieran Short <kieran.short at gmail.com>于2014年7月7日星期一写道：
>>>
>>> Run it in compatibility mode.
>>>>
>>>> To do this, do the following.
>>>>
>>>> Right click imagej/fiji.
>>>> Select properties.
>>>> Go to the Compatibility tab.
>>>> Check the "run this program in compatibility mode for:" box.
>>>> Select Windows XP (Service Pack 3).
>>>> Click Apply.
>>>> Click OK.
>>>>
>>>> Then try and run it.
>>>>
>>>> When I can work out how to include plugins during compilation I will
>>>> try to compile.a win64 version. At such q time i'd happily provide
>>>> binaries. Im only a part time python progammer though and therefore have
>>>> little experience with debugging compilation issues. Since Compatibility
>>>> Mode 'just works' for us, it isn't a high priority for me.
>>>>
>>>> Cheers Kieran
>>>> On 08/07/2014 10:32 AM, "Ke Li" <tianlankeke at gmail.com> wrote:
>>>>
>>>>> Hi Mark & Luke,
>>>>>
>>>>> I'm writing to ask whether there is a solution for running the
>>>>> openSPIM software in the 64bit system? (The uManager studio can't be loaded
>>>>> normally in my 64 bit system) Can I get access to the source code for
>>>>> modification?
>>>>>
>>>>> [image: Inline image 1]
>>>>>
>>>>> Thanks,
>>>>> Ke
>>>>>
>>>>> Ke Li
>>>>> Research Assistant
>>>>> Biomedical Engineering
>>>>> Johns Hopkins University
>>>>> Phone: 410-934-9802
>>>>> Email: kli26 at jhu.edu
>>>>>
>>>>> _______________________________________________
>>>>> OpenSPIM mailing list
>>>>> OpenSPIM at openspim.org
>>>>> http://openspim.org/mailman/listinfo/openspim
>>>>>
>>>>>
>>>
>>> --
>>> Ke Li
>>> Research Assistant
>>> Biomedical Engineering
>>> Johns Hopkins University
>>> Phone: 410-934-9802
>>> Email: kli26 at jhu.edu
>>>
>>>
>>
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