[OpenSPIM] Picard hi-res stage
Monika Pawłowska
m.pawlowska at nencki.gov.pl
Thu Jan 22 09:50:27 CST 2015
Hi Ulrik & Johannes,
I hope this is the screenshot you need. Not much in it though.
What I meant about two separate issues is that there is on one hand the
32767 limit and on the other - the value 9000 which is hard-coded in
several places as Johannes noted. (My programming skills are rusty these
days, but from my undergrad times I remember that hard-coding constants
into random places in code is not nice. :) )
Regards,
Monika
W dniu .01.2015 o 14:58 Johannes Schindelin <johannes.schindelin at gmx.de>
pisze:
> Hi Ulrik & Monika,
>
> On 2015-01-22 14:48, Ulrik Günther wrote:
>
>> On Jan 22, 2015, at 11:54 AM, Monika Pawłowska
>> <m.pawlowska at nencki.gov.pl> wrote:
>>
>>> thanks to the help of Ulrik I was able to install and run the OpenSPIM
>>> plugin in my lab.
>>> Glad it worked for you :-)
>>> -integer range issue: I have bought the new Hi-Res Picard stage which
>>> cando 45 000 steps. However, in the OpenSPIM plugin I can only do 32
>>> 767steps (16bit integer range if I'm not wrong)
>>>
>> I doubt the OpenSPIM plugin even knows about the existence of a
>> high-res version of the stage, but we can incorporate that.
>
> I guess it is time to address the TODO here:
>
> https://github.com/openspim/SPIMAcquisition/blob/d0276596c91b5764b21b11146a60e248f5f74506/src/main/java/spim/SPIMAcquisition.java#L124-L126
>
> and while at it, we must not forget
>
> https://github.com/openspim/SPIMAcquisition/blob/d0276596c91b5764b21b11146a60e248f5f74506/src/main/java/spim/setup/PicardStage.java#L34-L42
>
> nor
>
> https://github.com/openspim/SPIMAcquisition/blob/d0276596c91b5764b21b11146a60e248f5f74506/src/main/java/spim/setup/PicardXYStage.java#L51-L59
>
> Ciao,
> Johannes
>
> P.S.: I cheated and let Git do all the work: `git grep 9000`...
--
Monika Pawłowska
Nencki Institute
Laboratory of Neurobiology
3, Pasteur Street
02-093 Warsaw, Poland
phone: (+48) 22 5892 427
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