[OpenSPIM] search for 4D-stage dll
Luke Stuyvenberg
stuyvenberg at wisc.edu
Wed Jul 9 06:55:35 CDT 2014
Hi Christian,
Sorry for the delay! Windows 7 32-bit shouldn't have much trouble running the OpenSPIM software; we've had several people now run the system on 32-bit Windows 7 with no problems. Is there a particular error you get while running the program on Windows 7? (64-bit OpenSPIM is still being worked on, though some users have suggested that the 32-bit version can run in 64-bit Windows using compatibility mode.)
For changing the axes around, it should work to put in different serial numbers during set-up. When adding the Picard X/Y Stage device, put in to the Serial Number (X) field the number after 'SN' on the X stage sticker. For Serial Number (Y), use the number from the Z stage. Then, when adding the Picard Z Stage device, put in the number from the Y stage. (This is an unusual set-up; if you don't mind my asking, for what kind of experiments are you using the OpenSPIM system? I'm always interested in the unique ways people apply the hardware and software!)
Hope this helps!
Luke
On 07/07/14, rouviere christian wrote:
> hello everybody
>
> I forget to mentioned that I cant run the Open SPIM package under Fiji
> because all our computers are now under Windows 7.....
>
> Thank for your help.
>
> Christian
>
> Le 03/07/2014 17:37, rouviere christian a écrit :
> > Hi Mark,
> >
> > I found the drivers ! thank you.
> > I am building an OpenSPIM and, in, that technologie, I need to acquire
> > a stack of image by moving the stage in Y direction instead of Z
> > direction like in confocal microscopie. so I tried to mislead
> > microManager by changing the adress between the Z and the Y motor.
> > But unfortunatly that doesnt change anything, the Z motor continue to
> > move in place of the Y what I expected ! Do you know how I can do to
> > drive the Y motor instead of the Z with Micro Manager ?
> > And a second question, sell you a joystick that drive the 4D stage ?:
> > It can be easiest and quicker to move the sample with that kind of
> > device between two acquisitions expériment
> > Best,
> >
> > Christian
> >
> >
> >
> > Le 24/06/2014 23:01, Mark Tsuchida a écrit :
> >> Hi Christian,
> >>
> >> 1) Make sure you are using a recent nightly build of Micro-Manager
> >> (the Picard device adapter has been in the OpenSPIM project for a
> >> while but was added to the official Micro-Manager project just _after_
> >> the 1.4.17 release).
> >>
> >> https://micro-manager.org/wiki/Micro-Manager_Nightly_Builds
> >>
> >> 2) You do not need to copy the Picard DLLs (they are included in the
> >> Micro-Manager installer) if you use a nightly build since 20140519.
> >>
> >> Best,
> >> Mark
> >>
> >>
> >> On Tue, Jun 24, 2014 at 8:12 AM, Kevin W Eliceiri <eliceiri at wisc.edu>
> >> wrote:
> >>> Dear Christian,
> >>>
> >>> Yes, we routinely use and works fine. When you install the driver,
> >>> you are saying Micromanager won't see? Luke can you help?
> >>>
> >>>
> >>> best
> >>> kevin
> >>>
> >>> On 06/24/14, Jean Depatie wrote:
> >>>>
> >>>>
> >>>>
> >>>> Hello Christian,
> >>>>
> >>>>
> >>>>
> >>>> Sorry about your troubles with Micromanager.
> >>>>
> >>>> I have no experience with this software.
> >>>>
> >>>> But, I am hoping one of the people on the CC list (above) will
> >>>> respond to your email soon.
> >>>>
> >>>> They are the people that have developed the software to bridge
> >>>> Micromanager to our software DLL that controls the 4D-Stage.
> >>>>
> >>>> Let me know if you are still having problems, I can contact them
> >>>> directly for you.
> >>>>
> >>>> Thanks
> >>>>
> >>>>
> >>>>
> >>>> Picard Industries
> >>>>
> >>>> Jean-Francois (John) Depatie
> >>>>
> >>>> Engineer/Owner
> >>>>
> >>>> 585-589-0358
> >>>>
> >>>> www.Picard-Industries.com(http://www.Picard-Industries.com)
> >>>>
> >>>>
> >>>>
> >>>>
> >>>>
> >>>>
> >>>>
> >>>>
> >>>> From: rouviere christian [mailto:rouviere at obs-vlfr.fr](javascript:main.compose()
> >>>> Sent: Monday, June 23, 2014 9:20 AM
> >>>> To: Jean Depatie
> >>>> Cc: openspim at openspim.org; 'Nico Stuurman'; marktsuchida at gmail.com;
> >>>> 'Curtis Rueden'; eliceiri at wisc.edu
> >>>> Subject: Re: search for 4D-stage dll
> >>>>
> >>>>
> >>>>
> >>>>
> >>>>
> >>>> Hello John,
> >>>>
> >>>> yes I dowload and can drive easely the 4Z stage with your software,
> >>>> but under micro manager I did this protocol : (micromanager devices) :
> >>>>
> >>>>
> >>>>
> >>>> PicardStagePicardStage
> >>>>
> >>>> Summary:
> >>>>
> >>>> Picard Industries USB Slide I/II and USB Twister
> >>>>
> >>>> Author:
> >>>>
> >>>> Johannes Schindelin and Luke Stuyvenberg
> >>>>
> >>>> License:
> >>>>
> >>>> BSD
> >>>>
> >>>> Platforms:
> >>>>
> >>>> Windows
> >>>>
> >>>> Installation
> >>>> Download the USB 4D stage
> >>>> software(http://www.picard-industries.com/products.html#usb-4d-stage)
> >>>> from Picard. Run the installer, and also copy the file 4D-Stage DLL
> >>>> and Docs\Win32\PiUsb.dll (for 32-bit Micro-Manager) or 4D-Stage DLL
> >>>> and Docs\x64\PiUsb.dll (for 64-bit Micro-Manager) into your
> >>>> Micro-Manager folder.
> >>>>
> >>>>
> >>>>
> >>>>
> >>>> But un fortunatly I can't see the Picard industrie driver when a
> >>>> run the hardware configuration wizard...
> >>>> If you know what happens there, thank to help me.
> >>>>
> >>>> Best,
> >>>>
> >>>> Christian
> >>>>
> >>>> Le 13/06/2014 17:32, Jean Depatie a écrit :
> >>>>
> >>>>
> >>>>> Hello Christian,
> >>>>>
> >>>>>
> >>>>>
> >>>>> Sorry to hear about your troubles with our USB-4D-Stage software.
> >>>>>
> >>>>> The DLL files should have been loaded in the C:\Program
> >>>>> Files\Picard Industries\USB 4D-Stage Application directory.
> >>>>>
> >>>>> Check to see if they are there.
> >>>>>
> >>>>> Are you able to run the Stage with our Windows application for
> >>>>> testing?
> >>>>>
> >>>>> If so, then the DLL files must be there (somewhere), the
> >>>>> application uses them.
> >>>>>
> >>>>>
> >>>>>
> >>>>> If you have any question with using Micro Manager, I encourage you
> >>>>> to ask the micromanager list (at
> >>>>> www.Picard-Industries.com(https://www.micro-manager.org/wiki/Micro-Manager%20Community"
> >>>>> target="1">https://www.micro-manager.org/wiki/Micro-Manager%20Community)
> >>>>> with any questions as well. I've cced our collaborator Nico
> >>>>> Stuurman who is lead of the micromanager project and one of the
> >>>>> lead programmers Mark Tsuchida. I know they would like to address
> >>>>> any questions or concerns you might have.
> >>>>>
> >>>>>
> >>>>>
> >>>>> As for my French, I grew-up with French speaking parents (from
> >>>>> Quebec) so I did learn to speak French.
> >>>>>
> >>>>> But I was born in the States (Vermont) and went to English schools.
> >>>>>
> >>>>> There is very little opportunity to speak French here, except with
> >>>>> family.
> >>>>>
> >>>>> I would need to move to Quebec (or France) to regain my full use
> >>>>> of my original language.
> >>>>>
> >>>>> If I did, I am sure it would come back quickly.
> >>>>>
> >>>>> Thanks (Merci)
> >>>>>
> >>>>>
> >>>>>
> >>>>> Picard Industries
> >>>>>
> >>>>> Jean-Francois (John) Depatie
> >>>>>
> >>>>> Engineer/Owner
> >>>>>
> >>>>> 585-589-0358
> >>>>>
> >>>>>
> >>>>>
> >>>>>
> >>>>>
> >>>>>
> >>>>>
> >>>>>
> >>>>>
> >>>>>
> >>>>> From: rouviere christian [mailto:rouviere at obs-vlfr.fr(javascript:main.compose()
> >>>>> <rouviere at obs-vlfr.fr>]
> >>>>> Sent: Friday, June 13, 2014 5:06 AM
> >>>>> To: jdepatie at picard-industries.com <jdepatie at picard-industries.com>
> >>>>> Subject: search for 4D-stage dll
> >>>>>
> >>>>>
> >>>>>
> >>>>>
> >>>>>
> >>>>> Hello John,
> >>>>>
> >>>>> I am trying to install the 4D stage under Micro Manager software.
> >>>>> (I am involved in the project with F . Brau that order the stage)
> >>>>> Reading the instruction under the installation of that device into
> >>>>> the MManager website https://www.micro-manager.org/wiki/PicardStage
> >>>>> (here is a copy :
> >>>>>
> >>>>>
> >>>>>
> >>>>>
> >>>>> PicardStagePicardStage
> >>>>>
> >>>>> Summary:
> >>>>>
> >>>>> Picard Industries USB Slide I/II and USB Twister
> >>>>>
> >>>>> Author:
> >>>>>
> >>>>> Johannes Schindelin and Luke Stuyvenberg
> >>>>>
> >>>>> License:
> >>>>>
> >>>>> BSD
> >>>>>
> >>>>> Platforms:
> >>>>>
> >>>>> Windows
> >>>>>
> >>>>> Installation
> >>>>> Download the USB 4D stage
> >>>>> software(http://www.picard-industries.com/products.html#usb-4d-stage)
> >>>>> from Picard. Run the installer, and also copy the file 4D-Stage
> >>>>> DLL and Docs\Win32\PiUsb.dll (for 32-bit Micro-Manager) or
> >>>>> 4D-Stage DLL and Docs\x64\PiUsb.dll (for 64-bit Micro-Manager)
> >>>>> into your Micro-Manager folder.
> >>>>>
> >>>>>
> >>>>> But unfortunatly I do not find the 4D-stage DLL in the package
> >>>>> that I download from your site. Could you help in in that purpose ?
> >>>>>
> >>>>> Merci (are you speaking French ?)
> >>>>>
> >>>>>
> >>>>> Christian Rouviere
> >>>>>
> >>>>>
> >>>>>
> >>>>>
> >>>>>
> >>>>>
> >>>>>
> >>>>>
> >>>>>
> >>>>>
> >>>>>
> >>>>>
> >>>>>>
> >>>>>>
> >>>>>>
> >>>>>>
> >>>>>>
> >>>>>>
> >>>>>>
> >>>>>>
> >>>>>>
> >>>>>>
> >>>>>> Hello Helene,
> >>>>>>
> >>>>>>
> >>>>>>
> >>>>>> Your order for a USB 4D-Stage has been shipped using FedEx
> >>>>>> International.
> >>>>>>
> >>>>>> The tracking number is 8658 5443 1413.
> >>>>>>
> >>>>>> You can use their website www.fedex.com(http://www.fedex.com) to
> >>>>>> check on its progress.
> >>>>>>
> >>>>>> Attached is a copy of the invoice for this work.
> >>>>>>
> >>>>>> A hard copy was sent with your order.
> >>>>>>
> >>>>>> Please see that it is forwarded to the correct people for prompt
> >>>>>> payment.
> >>>>>>
> >>>>>> If there is anything else we can do to help with your
> >>>>>> application, please
> >>>>>>
> >>>>>> contact me directly.
> >>>>>>
> >>>>>> Thanks (Merci)
> >>>>>>
> >>>>>>
> >>>>>>
> >>>>>> Picard Industries
> >>>>>>
> >>>>>> Jean-Francois (John) Depatie
> >>>>>>
> >>>>>> Engineer/Owner
> >>>>>>
> >>>>>> 585-589-0358
> >>>>>>
> >>>>>> www.Picard-Industries.com(http://www.Picard-Industries.com)
> >>>>>>
> >>>>>>
> >>>>>>
> >>>>>>
> >>>>>>
> >>>>>>
> >>>>>>
> >>>>>> -----Original Message-----
> >>>>>>
> >>>>>> From: Hélène Choux [mailto:choux at ipmc.cnrs.fr(javascript:main.compose() <choux at ipmc.cnrs.fr>]
> >>>>>>
> >>>>>> Sent: Friday, September 20, 2013 10:53 AM
> >>>>>>
> >>>>>> To: Jean Depatie
> >>>>>>
> >>>>>> Cc: Frédéric Brau
> >>>>>>
> >>>>>> Subject: Order N° 60127
> >>>>>>
> >>>>>>
> >>>>>>
> >>>>>> Mr Depatie
> >>>>>>
> >>>>>>
> >>>>>>
> >>>>>> Vous trouverez en pièce jointe le bon de commande pour l'achat
> >>>>>> d'un "USB
> >>>>>>
> >>>>>> powered and controlled 4D-stage sample arm" selon votre devis du 18
> >>>>>>
> >>>>>> septembre.
> >>>>>>
> >>>>>>
> >>>>>>
> >>>>>> Bien cordialement
> >>>>>>
> >>>>>>
> >>>>>>
> >>>>>>
> >>>>>>
> >>>>>> --
> >>>>>>
> >>>>>> Hélène CHOUX
> >>>>>>
> >>>>>> Administrateur
> >>>>>>
> >>>>>> Institut de Pharmacologie Moléculaire et Cellulaire - UMR 7275
> >>>>>> 660, route
> >>>>>>
> >>>>>> des Lucioles
> >>>>>>
> >>>>>> 06560 VALBONNE
> >>>>>>
> >>>>>> Tel. 04 93 95 77 09 - Fax 04 93 95 77 08
> >>>>>>
> >>>>>>
> >>>>>>
> >>>>>>
> >>>>>>
> >>>>>>
> >>>>>>
> >>>>>>
> >>>>>>
> >>>>>
> >>>>>
> >>>>> --
> >>>>>
> >>>>>
> >>>>>
> >>>>> OBSERVATOIRE OCEANOLOGIQUE
> >>>>>
> >>>>> UMR7009 Biologie du Developpement
> >>>>>
> >>>>> Christian Rouvière
> >>>>>
> >>>>> 181 chemin du Lazaret
> >>>>>
> >>>>> 06230 VILLEFRANCHE SUR MER
> >>>>>
> >>>>>
> >>>>>
> >>>>>
> >>>>>
> >>>>> Mèl : rouviere at obs-vlfr.fr <rouviere at obs-vlfr.fr>
> >>>>>
> >>>>> Responsable plateforme d'imagerie (PIV)
> >>>>>
> >>>>> http://biodev.obs-vlfr.fr/fr/services_a_la_recherche/imagerie.html
> >>>>>
> >>>>> Tel : 04 93 76 37 72
> >>>>>
> >>>>> Fax : 04 93 76 37 92
> >>>>>
> >>>>> WEB d'unité: www.biodev.obs-vlfr.fr(http://www.biodev.obs-vlfr.fr)
> >>>>>
> >>>>> Groupement des Plate-formes labellisées "IBiSA" :
> >>>>> http://www.mica-bio.fr/
> >>>>>
> >>>>
> >>>>
> >>>>
> >>>>
> >>>>
> >>>> --
> >>>>
> >>>>
> >>>>
> >>>> OBSERVATOIRE OCEANOLOGIQUE
> >>>>
> >>>> UMR7009 Biologie du Developpement
> >>>>
> >>>> Christian Rouvière
> >>>>
> >>>> 181 chemin du Lazaret
> >>>>
> >>>> 06230 VILLEFRANCHE SUR MER
> >>>>
> >>>>
> >>>>
> >>>>
> >>>>
> >>>> Mèl : rouviere at obs-vlfr.fr <rouviere at obs-vlfr.fr>
> >>>>
> >>>> Responsable plateforme d'imagerie (PIV)
> >>>>
> >>>> http://biodev.obs-vlfr.fr/fr/services_a_la_recherche/imagerie.html
> >>>>
> >>>> Tel : 04 93 76 37 72
> >>>>
> >>>> Fax : 04 93 76 37 92
> >>>>
> >>>> WEB d'unité: www.biodev.obs-vlfr.fr(http://www.biodev.obs-vlfr.fr)
> >>>>
> >>>> Groupement des Plate-formes labellisées "IBiSA" :
> >>>> http://www.mica-bio.fr/
> >>> --
> >>> Kevin W. Eliceiri
> >>> Director, Laboratory for Optical and Computational Instrumentation
> >>> (LOCI)
> >>> Departments Cell and Molecular Biology and Biomedical Engineering
> >>> Affiliate Principal Investigator, Morgridge Institute for Research
> >>> (MIR)
> >>> Room 271 Animal Sciences, 1675 Observatory Drive, Madison, WI 53706
> >>> Phone: 608-263-6288
> >
> >
>
>
> --
>
> OBSERVATOIRE OCEANOLOGIQUE
> UMR7009 Biologie du Developpement
> Christian Rouvière
> 181 chemin du Lazaret
> 06230 VILLEFRANCHE SUR MER
>
>
> Mèl : rouviere at obs-vlfr.fr
> Responsable plateforme d'imagerie (PIV)
> http://biodev.obs-vlfr.fr/fr/services_a_la_recherche/imagerie.html
> Tel : 04 93 76 37 72
> Fax : 04 93 76 37 92
> WEB d'unité: www.biodev.obs-vlfr.fr
> Groupement des Plate-formes labellisées "IBiSA" : http://www.mica-bio.fr/
>
>
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