<html><head><meta http-equiv="Content-Type" content="text/html charset=utf-8"></head><body style="word-wrap: break-word; -webkit-nbsp-mode: space; -webkit-line-break: after-white-space;" class="">Hi Martin,<div class=""><br class=""></div><div class="">Maybe, I can help in this case. However, the problem is that I cannot reproduce that error because I have a different setup.</div><div class="">One of my doubts is that we try to get the values from stages in the source code(<a href="https://github.com/openspim/SPIMAcquisition/blob/master/src/main/java/spim/SPIMAcquisition.java#L1057-L1077" class="">https://github.com/openspim/SPIMAcquisition/blob/master/src/main/java/spim/SPIMAcquisition.java#L1057-L1077</a>).</div><div class="">It seemed to cause the error.</div><div class=""><br class=""></div><div class="">If you would not mind, I can provide you a custom-made plugin for verifying the problem, which might involve several (sending a plugin | receiving a result)+.</div><div class="">Then, I would be able to fix the bug. Please, let me know if you like this way.</div><div class=""><br class=""></div><div class="">Cheers,</div><div class="">HongKee</div><div class=""><br class=""></div><div class=""><div class=""><br class=""><div><blockquote type="cite" class=""><div class="">On Nov 10, 2015, at 6:40 PM, Martin Capek <<a href="mailto:martin.capek@fgu.cas.cz" class="">martin.capek@fgu.cas.cz</a>> wrote:</div><br class="Apple-interchange-newline"><div class="">
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Dear all,<br class="">
could anybody help me with the following software problem? <br class="">
<br class="">
Micromanager knows all components of our SPIM system: CUBE laser, Picard stage, Andor camera. I can use all of them independently without troubles in MM: opening and closing laser shutter, moving with the stage in "Stage Control", seeing images in "Live" view.
However, when opening "Acquire SPIM image", nothing happens and the Java exceptions are then in the corelog, please, see the attachments.<br class="">
<br class="">
Thank you very much for your help and comments!<br class="">
Martin<br class="">
<br class="">
<br class="">
----------------------<br class=""><p style="font-family: Calibri, sans-serif; color: #404040;
line-height: 120%; text-autospace: none; font-size: 11.0pt" class="">
Martin Capek, Ph.D. <br class="">
Dpt. Biomathematics<br class="">
</p><p style="font-family: Calibri, sans-serif; color: #404040;
font-size: 10.0pt" class="">
Institute of Physiology ASCR, v.v.i. <br class="">
Videnska 1083<br class="">
142 20 Praha 4 </p><p style="font-family: Calibri, sans-serif; color: #404040;
font-size: 10.0pt" class="">
Tel. +420 241 062 334<br class="">
<a href="http://fgu.cas.cz/" target="_blank" class="">http://fgu.cas.cz</a></p>
<br class="">
<br class="">
<br class="">
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<span id="cid:3BC62FDD-D4B3-482B-AA8F-DA641E1DFEB3@mpi-cbg.de"><CoreLog20151110T164802_pid5508.txt></span>_______________________________________________<br class="">OpenSPIM mailing list<br class=""><a href="mailto:OpenSPIM@openspim.org" class="">OpenSPIM@openspim.org</a><br class="">http://openspim.org/mailman/listinfo/openspim<br class=""></div></blockquote></div><br class=""><div apple-content-edited="true" class="">
<div style="color: rgb(0, 0, 0); font-family: Helvetica; font-style: normal; font-variant: normal; font-weight: normal; letter-spacing: normal; line-height: normal; orphans: 2; text-align: -webkit-auto; text-indent: 0px; text-transform: none; white-space: normal; widows: 2; word-spacing: 0px; -webkit-text-size-adjust: auto; -webkit-text-stroke-width: 0px; word-wrap: break-word; -webkit-nbsp-mode: space; -webkit-line-break: after-white-space; " class=""><div style="color: rgb(0, 0, 0); font-family: Helvetica; font-style: normal; font-variant: normal; font-weight: normal; letter-spacing: normal; line-height: normal; orphans: 2; text-align: -webkit-auto; text-indent: 0px; text-transform: none; white-space: normal; widows: 2; word-spacing: 0px; -webkit-text-size-adjust: auto; -webkit-text-stroke-width: 0px; word-wrap: break-word; -webkit-nbsp-mode: space; -webkit-line-break: after-white-space; " class=""><span class="Apple-style-span" style="border-collapse: separate; line-height: normal; border-spacing: 0px;"><div style="word-wrap: break-word; -webkit-nbsp-mode: space; -webkit-line-break: after-white-space; " class=""><span class="Apple-style-span" style="border-collapse: separate; color: rgb(0, 0, 0); font-family: Helvetica; font-style: normal; font-variant: normal; font-weight: normal; letter-spacing: normal; line-height: normal; orphans: 2; text-align: -webkit-auto; text-indent: 0px; text-transform: none; white-space: normal; widows: 2; word-spacing: 0px; border-spacing: 0px; -webkit-text-decorations-in-effect: none; -webkit-text-size-adjust: auto; -webkit-text-stroke-width: 0px; "><div style="word-wrap: break-word; -webkit-nbsp-mode: space; -webkit-line-break: after-white-space; " class=""><span class="Apple-style-span" style="border-collapse: separate; color: rgb(0, 0, 0); font-family: Helvetica; font-style: normal; font-variant: normal; font-weight: normal; letter-spacing: normal; line-height: normal; orphans: 2; text-align: -webkit-auto; text-indent: 0px; text-transform: none; white-space: normal; widows: 2; word-spacing: 0px; border-spacing: 0px; -webkit-text-decorations-in-effect: none; -webkit-text-size-adjust: auto; -webkit-text-stroke-width: 0px; "><div style="word-wrap: break-word; -webkit-nbsp-mode: space; -webkit-line-break: after-white-space; " class=""><span class="Apple-style-span" style="border-collapse: separate; color: rgb(0, 0, 0); font-family: Helvetica; font-style: normal; font-variant: normal; font-weight: normal; letter-spacing: normal; line-height: normal; orphans: 2; text-align: -webkit-auto; text-indent: 0px; text-transform: none; white-space: normal; widows: 2; word-spacing: 0px; border-spacing: 0px; -webkit-text-decorations-in-effect: none; -webkit-text-size-adjust: auto; -webkit-text-stroke-width: 0px; "><div style="word-wrap: break-word; -webkit-nbsp-mode: space; -webkit-line-break: after-white-space; " class=""><span class="Apple-style-span" style="border-collapse: separate; color: rgb(0, 0, 0); font-family: Helvetica; font-style: normal; font-variant: normal; font-weight: normal; letter-spacing: normal; line-height: normal; orphans: 2; text-align: -webkit-auto; text-indent: 0px; text-transform: none; white-space: normal; widows: 2; word-spacing: 0px; border-spacing: 0px; -webkit-text-decorations-in-effect: none; -webkit-text-size-adjust: auto; -webkit-text-stroke-width: 0px; "><div class=""><br class="Apple-interchange-newline">--</div><div class="">HongKee Moon</div><div class="">Software Engineer</div><div class="">Scientific Computing Facility</div><div class=""><br class=""></div><div class="">Max Planck Institute of Molecular Cell Biology and Genetics</div><div class="">Pfotenhauerstr. 108</div><div class="">01307 Dresden</div><div class="">Germany</div><div class=""><br class=""></div><div class="">fon: +49 351 210 2740</div><div class="">fax: +49 351 210 1689</div><div class=""><a href="http://www.mpi-cbg.de" class="">www.mpi-cbg.de</a></div></span></div></span></div></span></div></span></div></span></div></div>
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